Virus DNA may help bacteria survive at hydrothermal vents.
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Thursday, August 21st, 2008

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JUST EXPLORINGAn octopus attached itself to the side of a tank researchers used to sample ocean water from the surface to as deep as 2,500 meters and around hydrothermal vents. What the team discovered about the bacteria and viruses living around the vents surprised them. Full story.E. Wommack/ Univ. of Delaware Not all viral infections are nasty. Marine bacteria thriving
in extreme heat and harsh chemicals spewing from deep-sea hydrothermal vents
may get significant help from viruses, researchers report online in the Aug. 21
ISME Journal.
Viruses that inject themselves into the marine bacteria play
an “incredibly important” role in shaping these aquatic ecosystems and might
even encourage evolution in microbes, the scientists say.
“The real splash is that at the deep sea vents we found consistently
high levels of bacteria that seemed to harbor these cryptic viruses,” says study
co-author Eric Wommack, a viral ecologist at the University
of Delaware in Newark. Virus-wielding bacteria have been
found in other marine environments, but this study is the first to investigate the
role that viruses play in deep-ocean ecosystems.
What’s more, the vent viruses appear to harbor genes never before
encountered in any other organism, says the study’s lead author, environmental
virologist Shannon Williamson of the J. Craig Venter Institute in La Jolla, Calif.

SMOKING AND SPEWINGPlumes of particles stream from this deep sea hydrothermal vent. Closer to the base, unseen virus material and virus-wielding bacteria diffuse through the vent pores. The viruses may help the bacteria survive in such a harsh environment. Based on that, “I am willing to bet that these viral
populations are the largest reservoir of unknown genetic diversity on the
planet,” Wommack says.
The sheer abundance of virus-harboring microbes and virus
material at these hydrothermal vents suggests their role is pivotal, Williamson
says. Analyzing the water column from the sea surface down to the 2,500-meter-deep
sea vents of the East Pacific Rise, the team found that, around the
hydrothermal vents, virus particles outnumber bacterial cells by a factor of
ten.
The viruses inject their DNA into the bacteria, but do not
always kill the bacteria. Instead, the viruses can enter the cells and live in
a temperate or “cryptic” state where they incorporate their genes into bacterial
DNA. When the cells replicate, the virus genomes replicate right along with
them.
The viral genes could help the bacteria to survive in the
waters around the vent, which can reach 20 to 70 degrees Celsius, the
researchers suggest. Surrounding ocean water is as cold as 2º Celsius.
Environmental triggers such as ultraviolet radiation or
harsh chemicals can spur viruses into their active, cell-destroying state. Yet
in the harsh environment of the hydrothermal vents, where sulfides and iron
compounds are prevalent, most of the viruses remained dormant inside the
bacteria. “So the next question is,” Wommack says, “are the viruses carrying certain
genes vital to the bacteria’s survival?”
The bacteria are “like a ticking time bomb,” he says. Some
of the viruses will become active, destroying their host bacteria to distribute
their genes. The genes can also be exchanged from one bacterium to another. This
swapping around of the beneficial virus genes may not only drive the evolution
of the microbes, but also ensure that the viruses maintain their populations,
Wommack says.
That’s possible, comments microbiologist Kathleen Scott of
the University of South Florida in Tampa. “The authors have discovered something
really interesting down there, and it will be exciting to see further
sampling.”
In the next study, Williamson and colleagues plan to further
analyze the viral and bacterial genomes. And if the researchers find an
extraordinarily high proportion of viral genes never before seen elsewhere, “that
will be a smoking gun,” Wommack says. “It would mean that the viruses carry certain
genes that help the bacteria cope in the harsher vent waters.”
Found in: Biology, Earth and Life
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