Primordial soup lives again
Newly analyzed vials hosted contents of an experiment testing whether life could originate in a volcano’s local environment.
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OLD DATA, NEW FINDINGSJeffrey Bada holds original samples from Stanley Miller's famous 1953 primordial soup experiment. Bada and his colleagues used the samples to build on Miller’s work about the origins of life.Scripps Institution of Oceanography, UC San Diego

After decades of languishing in a cardboard box, unanalyzed vials from a famous chemistry experiment have been brought back to the lab, revealing new clues to the beginnings of life on Earth.

Over 50 years ago, Stanley Miller, then a 23-year-old graduate student, conducted an experiment that is now a staple of biology. Miller and his adviser, Nobel laureate Harold Urey, showed that amino acids, the building blocks of proteins, could be made from a cocktail of basic precursors, the so-called primordial soup.

A research team led by Miller’s former graduate student Jeffrey Bada analyzed leftovers from a variation on this experiment. The researchers report in the Oct. 17 Science that remnants from an experiment conducted with a simulated volcanic environment contain an even larger number of biologically important amino acids.

Urey and Miller re-created what they thought was the atmosphere of early Earth — a stew of methane, ammonia, hydrogen and water — and zapped the contents with an electric shock similar to lightning. After a night of sparking, the vial turned red, then yellow and finally brown, indicating the presence of compounds. Analyses confirmed the presence of a mixture of amino acids, which, at the time, many scientists thought were the basis of life.

“From the historical point of view, the Miller experiment transformed the study of the origin of life in the ’50s into an important research field,” says Pascale Ehrenfreund, an astrobiologist at George Washington University in Washington, D.C.

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MMM…MMM…LIFEPrimordial soup is still good after 55 years. A new study suggests that life may have originated in localized regions around a volcanic explosion.Scripps Institution of Oceanography, UC San Diego

Miller published his results in a brief, influential report in Science in 1953. Bada, a geochemist at Scripps Institution of Oceanography in La Jolla, Calif., reports his team’s reanalysis of that experiment also in Science, 55 years later.

“This all began when Antonio Lazcano casually mentioned that Stanley had some unanalyzed vials left over from the ’50s,” Bada says. Lazcano, of the Universidad Nacional Autónoma de México, is a coauthor on the latest Science report.

Before Miller died last year, the contents of his lab, including laboratory experiments and notebooks, were moved to Bada’s laboratory at Scripps. When Bada heard of the existence of the vials, he went back to his lab and began digging.

“We found these dusty Scotch-taped boxes, all carefully labeled. We were able to match the samples to Stanley’s lab notebook. It was so typical of Stanley, so nonchalant,” says Bada. Miller had described the volcanic experiment in notebooks, but never published the results.

Bada and lead author Adam Johnson, a biochemist at Indiana University, Bloomington, noticed that some of the vials’ contents were created in the presence of a stream of water vapor, which simulated the local environment of a volcano. The team carefully reconstituted the dried material in these vials, and analyzed the contents with modern techniques.

The team not only identified amino acids similar to the ones Miller reported in 1953 from the experiment without the steam jet, but also identified 10 types of amino acids not found in the original setup. Bada’s team concludes that the infusion of a jet of steam creates a more diverse mixture of amino acids.

“Being able to analyze 50-year-old residues with new laboratory techniques and equipment is an exciting adventure,” says Ehrenfreund.

While Miller’s original results have been replicated many times over, some geobiologists today question the relevance of his findings. They argue that early Earth’s environment was probably not like the unstable, reactive one Miller and Urey proposed. No one knows for sure, but most scientists today think it was milder than Miller and Urey’s assumption. The new report in Science argues that global conditions may not have mattered, because volcanoes belch reactive gas and steam into the atmosphere, creating local conditions that could be conducive to life.

“The model is that you have these small pockets, volcanic hot spots,” explains Bada, in which a volatile reducing atmosphere, one in which chemicals are more likely to react with one another, may have produced amino acids.

The team’s reanalysis makes it plausible that a shallow tide pool tucked into the side of a volcano and a fortuitous bolt of lightning could have led to an abundance of amino acids.

“The local volcanic scenario is clearly more favorable for synthesis than the classical version of this experiment,” explains Alan Schwartz, a scientist who studies the origins of life at Radboud University Nijmegen in the Netherlands.

Of course, the world has changed substantially since 1953. Questions about the origin of nucleic acids like DNA and RNA may take center stage today, but Miller’s original experiment, and what it told the world about life’s beginnings, has its place in history.

“I am sure that Stanley Miller would have been pleased by this report,” says Schwartz.

Gustaf Arrhenius, a former colleague of Miller’s at Scripps who also explores the beginnings of life, agrees. “Anybody would wish for himself to have a group of competent followers dedicated to examining the abandoned belongings of the past master and be lucky enough to be able to add to his legacy.”


Found in: Biology and Earth
Comments 3
  • All who're interested in this Topic should also look into the 'Tide Pool' experimenmts (sorry, I can't remember exactly who did them) that produced both Amino Acids, Lipids, AND Lipid 'Bubbles' containing the Amino Acids.
    It's clearly the 'muck' that the 'Breathe Of Life' was 'breathed into' - HA, HA, HA!
    All of these experiments lead one to wonder about Europa, Enceladus, etc. with even more curiosity, eh? though they could also be seen as 'proof' that Amino Acids and Prebiotic Organic Compounds are 'easy' for Nature to make; but not necessarilly 'life' as well.
    Put that in your Pipe and ......
    James Staples James Staples
    Oct. 24, 2008 at 11:36am
  • Life's Manifest

    Recapitulation of some earlier notes on
    The Drive, Nature And Purpose Of Life: Scientific Comprehension

    http://www.the-scientist.com/community/posts/list/54.page


    A. Uniqueness Of science among human artifacts

    ALL aspects of our culture are, of course, anthropoartifacts, including science. Yet among those artifacts science has a distinct uniqueness for us.

    During the recent several centuries in the course of human history humans have been developing science at an accelerating rate as a provider of convincing, ever closer approaching, approximate models of the real world.


    B. The drive and nature of life

    Life Genesis, formation of first genes, was a phenomenon of serendipitous occurrence, in a supportive environment, of 'favourably-directed' energy potential between in-coming sun's radiation and polymerizing RNA-related oligomeric configurations.

    The drive of life and of its evolution is to enhance the functionality and survivability of the genes, in order to maintain and enhance Earth-biosphere's temporary constrained energy storage and to maintain it BIO as long as possible.

    It is the genes, life's prime strata organisms, that evolve, and the evolution of genomes, the 2nd stratum of life, and of the 3rd life stratum cellular organisms, is an interenhancing consequence of their genes' evolution.


    C. The nature of life

    Earth Life: 1. a format of temporarily constrained energy, retained in temporary constrained genetic energy packages in forms of genes, genomes and organisms 2. a real virtual affair that pops in and out of existence in its matrix, which is the energy constrained in Earth's biosphere.

    Earth organism: a temporary self-replicable constrained-energy genetic system that supports and maintains Earth's biosphere by maintenance of genes.

    Gene: a primal Earth's organism. (1st stratum organism)

    Genome: a multigenes organism consisting of a cooperative commune of its member genes. (2nd stratum organism)

    Cellular organisms: mono- or multi-celled earth organisms. (3rd stratum organism)


    D. Update of underlying life sciences conception is thus feasible

    - First were independent individual genes, Earth's primal organisms.

    - Genes aggregated cooperatively into genomes, multigenes organisms, with genomes' organs.

    - Simultaneously or consequently genomes evolved protective and functional membranes, organs.

    - Then followed cellular organisms, with a variety of outer-cell membrane shapes and
    functionalities.

    This conception is a scientific, NOT TECHNOLOGICAL, life-science innovation.

    It is tomorrow's comprehension of life and of its evolution.

    IT IS FRAUGHT WITH INTRIGUING DARWINIAN EVOLUTION IMPLICATIONS.

    IT IS FRAUGHT WITH INTRIGUING TECHNOLOGICAL DEVELOPMENTS POTENTIALS.


    E. The purpose of OUR, human, life

    The purpose of OUR life and its promotion is ours to formulate and set. It derives solely from our cognition.


    Suggesting,

    Dov Henis

    http://blog.360.yahoo.com/blog-P81pQcU1dLBbHgtjQjxG_Q--?cq=1
    Dov Henis Dov Henis
    Oct. 21, 2008 at 11:00pm
  • It seems to me that someone ought to run the experiment again, in light of what we now know about "smokers" at the bottom of the ocean, where the ingredients are placed under pressure, in the presence of phosphates as well, in salt water. A very large number of anaerobic microbes exist around volcanic chimneys in the ocean, after all. Perhaps this is where it started!
    Diana Gainer Diana Gainer
    Oct. 17, 2008 at 6:27am
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  • Perkins, Sid. “Cooking up a key chemical of life,” Science News, September 9, 2000; Vol. 158 no. 11, p. 175 [Go to]
Citations & References:
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  • Johnson, Adam P. et al. “The Miller Volcanic Spark Discharge Experiment,” Science, October 16, 2008. DOI: 10.1126/science.1161527
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