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Science Friday
Sleep may clear the decks for next day’s learning
Fruit fly studies find that snoozing prunes connections between brain cells
Web edition : Thursday, April 2nd, 2009
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SOCIALIZING IS TIRINGSMALL PARTY. Fruit flies need more sleep after socializing, researchers at Washington University in St. Louis have discovered. They traced this increased need to 16 neurons that build connections as the flies socialize. Sleep weakens or severs some of the connections. IMAGE CREDIT: Washington University School of Medicine

You snooze, you lose connections between brain cells, two new studies suggest.

People have known for some time that getting enough sleep is crucial for proper brain function. “If you don’t get enough sleep your ability to acquire, process and recall information is going to be impaired,” says Paul Shaw, a neuroscientist at Washington University in St. Louis and coauthor of one of the new studies.

But scientists debate exactly how sleep helps the brain learn and remember. Two studies appearing in the April 3 Science suggest that sleep weakens or severs connections between brain cells to make way for new information.

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MAKING CONNECTIONSPictured are neurons, labled with green fluorescent protein, that drive fruit flies to sleep more after social interactions.Washington University School of Medicine

A study by Giorgio Gilestro, Giulio Tononi and Chiara Cirelli of the University of Wisconsin–Madison shows that proteins found in the connections between neurons, called synapses, build up in fruit fly brains while the flies are awake. Depriving flies of sleep leads to ever-greater levels of synaptic proteins, the researchers show. Levels of the proteins decrease as the flies sleep.

Scientists usually determine synapse strength by measuring electrical activity of neurons, but fruit fly brains are far too small for electrical measurements, Cirelli says. The proteins, she says, are markers of synaptic strength.

If true, the new finding would offer support for the theory of synaptic homeostasis, advanced by Tononi and Cirelli. The theory holds that sleep scales back the strength of connections between neurons, weakening the strongest connections and completely eliminating the weakest synapses. The cutbacks help save resources, the researchers say, and boost the signal of important memories over the noise of unneeded connections (SN: 12/20/08, p. 9). 

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THIS IS A FRUIT FLY'S BRAIN ON SLEEPThe longer fruit flies stay awake, the more proteins active at synapses build up (right). Sleep lowers levels of these proteins (left), indicating that one of sleep's functions may be to reduce or eliminate synapses to make room for learning the next day. courtesy of Chiara Cirelli

“We assume that if this is happening, it is a major function, if not the most important function, of sleep,” Cirelli says.

Other researchers have gathered conflicting data, though, suggesting that sleep aids in strengthening synapses, not weakening them.

Cirelli and Tononi’s new study is the first demonstration that sleep “does something” to synaptic connections, says Marcos Frank, a sleep researcher at the University of Pennsylvania in Philadelphia. But the technique is an indirect measure of the strength of synapses and doesn’t conclusively prove weakening of the connections. Some of his data indicate that sleep strengthens certain connections in kittens’ brains.

Cirelli says her group’s study addresses the function of sleep only in adult brains and it is too early to say whether sleep does different things to brains in young animals and people. She adds that even if isolated synapses gain strength during sleep, overall the brain loses connections during a snooze.

Frank isn’t the only skeptic of the synaptic homeostasis theory. Shaw has been studying how sleep affects learning and memory and set up his experiment, in part, to prove the idea wrong, he says. “I wasn’t buying it at the time, but the data are telling me I ought to.”

Work in Shaw’s lab previously showed that fruit flies need extra sleep after social interactions. In the new study, the researchers tracked the increased sleep drive to 16 neurons known as large lateral ventral neurons. These neurons are part of the circuitry that forms the circadian clock in the fruit fly brain. The team genetically engineered the flies to produce green fluorescent protein in neurons, making counting synapses easier. The study showed that the number of new synapses formed during social interactions decreased after flies slept. In contrast, sleep-deprived flies did not prune synapses, the researchers found. The data seems to support the theory since only sleeping flies lose synapses.

At first glance, losing synapses doesn’t seem like a good way to learn, Shaw admits. He speculates that sleep’s downsizing of the number of synapses keeps the flies’ brain circuits from getting overwhelmed by excitement and sensory input in social situations.

The new study also links learning and the need to snooze to three genes — rutabaga, period and blistered. Period was previously identified as a key gear in the fruit fly circadian clock. Blistered is the fruit fly–equivalent of human serum response factor, a gene involved in learning, memory and general brain rewiring.

Shaw says he’s not a complete convert to the synaptic homeostasis theory, though. He thinks sleep may weaken synapses in some circuits while it strengthens connections in other circuits.


Found in: Body & Brain
Comments 10
  • In 1989, at a DECUS conference, I attended a presentation on neural networks in which the presenter described a technique he had developed to clear out 'bad' connections.

    A typical way to train computer neural networks is to present them with a series of input data sets (such as photographs of woodlands either containing a tank or not). The neural network responds with its evaluation (yes/no) and then the programmer provides feedback to the neural network (yes there was a tank/no there was not), either strengthening the existing connections or weakening them.

    The presenter explained how bad associations tend to build up and are hard to remove. The technique he developed was, to the best of my recollection:

    1) Store the current state (State A) of the neural net; all of the interconnection values.
    2) Feed the net random inputs and observe its responses.
    3) Provide random feedback to those responses.
    4) Calculate the connection differences (State B) that built up during this process (what it learned).
    5) Subtract from State A the connection values it learned during the process; (State A) - (State B).

    After his talk, I suggested to the speaker that this seemed much like dreaming. A sort of random series of experiences, forgotten upon waking. He didn't acknowledge the parallel, but I've always thought the two processes seemed so similar that it warranted investigation.
    McGinnis McGinnis
    Apr. 5, 2009 at 12:18pm
  • The article is interesting and McGinnis put an interesting analogy; would you suggest the first steps towrads this investigation?

    Farhood Azarsina
    Farhood Azarsina Farhood Azarsina
    Apr. 8, 2009 at 7:33am
  • No End Of Passe Sleep Mantra


    A. "Sleep may clear the decks for next day’s learning"
    [Link was removed]
    Two separate studies suggest that sleep reduces connections between neurons in fruit flies’ brains.

    B. "Missing piece of plant clock found", about "the underlying biochemical mechanisms that control plant clocks". 2009 Passe Mantra.
    [Link was removed]

    C. No End Of Passe Sleep Mantra

    Future research reports will re-affirm, in sophisticated sciencelingo, that the rooster indeed brings on sunrise, or that Gazania flowers switch the sun on and off.

    It's about time to understand the origin and function of sleep. There is no "biochemical mechanisms that control bio-clocks". Bio-clocks are products of the innate active-sleep pattern of genes and genomes, parents of all Earth's Life, since in their days of genesis and early evolution direct sunlight was the only source of energy in pre-metabolism Earth life. Melatonin and some proteins are dark-and-light que signals evolved by later monocellular communities, pre-multicellular organisms, for timing intercells clean-up and maintenance processes when intracell genes-genome processes are at rest.


    Dov Henis
    [Link was removed]
    (Comments From The 22nd Century)
    Life's Manifest
    [Link was removed] #578
    EVOLUTION Beyond Darwin 200
    [Link was removed] #entry396201
    Dov Henis Dov Henis
    Apr. 10, 2009 at 4:16am
  • @McGinnis

    Fascinating idea. I made the "dream" connection by #2. It seems to make a good deal of sense to me.

    That is really interesting.
    Chris Rutledge Chris Rutledge
    Apr. 15, 2009 at 4:29am
  • CHOP used to be an acronym for Cyclophosphamide, drugs starting in H and O and prednisone but they changed the two middle drugs and kept the acronym (and added -R for rituxan). I had this for diffuse large B-cell lymphoma (NHL) in summer-fall 2003, after losing 20 lb of mostly muscle (down to 93 lb). I gained back 30 during and after chemo. Before starting chemo I was too weak to sit up but got progressively stronger during chemo as I regained muscle, except for periods of weakness for a copule of days after the 5 days of prednisone, which prevents muscle growth. My partner dragged me out for walks starting about a week after my first therapy, at first a slow progression to the curb and back (the porch step was a problem), then we made it to the near corner, the far corner, the nearby orchard a few houses away where I sat as he picked windfalls, eventually around the block, to the pharmacy 1/4 mile away (a 'milestone') and after four months I made it to town 1 mile away, rested at the only placeopen Christmas day (Chinese restaurant) and back. That summer sohbet I went swimming and managed 1.5 lengths of the area (20 = mile) first time, 3 second. Next summer I went with another lymphoma survivor and gradually made it to a mile with rests. I still drag myself up stairs by the handrail and runout of breath, but am up to 15 pushups and 50 situps. Start with vertical pushups against the wall. Normal activities are not enough. I can run 1/2 of a short block, slowly. I am 55 now and bike everywhere. Hot flashes continue 2.5 years but every 3 hours not 45 min and shorter and milder. Still hurts where I sit. Doctor told me the foot cramps and frequent colds are due to chemo. Colds are caused by chemo wiping out the memory part of your B cells (immune response) and should be temporary, but they advised a flu shot. See my diary of 6 months chemo at (or similar - go to the main site). How long has it taken others to regain muscle strength after weight loss? , Good post,I think so!abercrombie and fitch on Sale, Hoodies, Jeans, T-Shirts, Pants, Polos hollister abercrombie outlethollister clothing Abercrombie Men Tee abercrombie womens polos Ruehl No.925, Men, women, and children's clothing. abercrombie and fitch , [Link was removed] ,abercrombie and fitch and abercrombie and fitchfashion is bold and interesting, all thanks to the interestingand original designs of Don
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    webalem net webalem net
    Dec. 18, 2009 at 4:04pm
  • Genetic disorders are often caused by sperm DNA that has double strand breaks, copy number variations, point mutations and imprinting mutations that have to do with advancing paternal age. Men need to know about their biological clock and father babies in their 20s and very early



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Suggested Reading:
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  • Saey, T.H. 2008. Sleep Makes Room for Memories: Study shows sleep reduces harmful buildup of too many connections in the brain. Science News 174(Dec. 20): 9
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Citations & References:
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  • Donlea, J.M., Ramanan, N., and Shaw, P.J. 2009. Use-Dependent Plasticity in Clock Neurons Regulates Sleep Need in Drosophila Science 324(April 3): 105–108 doi: 10.1126/science.1166657
  • Gilestro, G.F., Tononi, G., and Cirelli, C. 2009. Widespread Changes in Synaptic Markers as a Function of Sleep and Wakefulness in Drosophila Science 324(April 3): 109–112 doi: 10.1126/science.1166673
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